Insertion junction: CLIP2.017123_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.017123
Chromosome:chromosome 9
Location:2989900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393395 (1 of 1) PTHR33477:SF3 - EMB|CAB72147.1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGCCGCACGCTGTCGGTGGACAGCACCGTGCTGATGCCCAGGCGGC
Internal bar code:CCGTTATAGCCCGTTGCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3321
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAGAGGGAAGAGGGCAGA
Suggested primer 2:GGGCTAGCTGGTCAGGTTAC