Insertion junction: CLIP2.031252_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.031252
Chromosome:chromosome 9
Location:2988711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393395 (1 of 1) PTHR33477:SF3 - EMB|CAB72147.1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAGGTGACGCGCATACGAGCGGGACGCGAGGAAGAAGGACGCGGCGG
Internal bar code:AACGGGTCCAAAAGGACGGAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1495
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTAACCTGACCAGCTAGCCC
Suggested primer 2:AAGCAAAGCATCCCGGAAGA