Common name: | SRH9 |
Defline: | |
Description: | |
Synonyms: | g4341.t1,SRH9 |
Chromosome: | chromosome 3 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
---|---|---|---|---|
LMJ.RY0402.083072_1 | LMJ.RY0402.083072 | CDS | 73 | 5.5 |
LMJ.RY0402.090074_1 | LMJ.RY0402.090074 | intron | 58 | 5.5 |
LMJ.RY0402.124580_1 | LMJ.RY0402.124580 | 5'UTR | 73 | 5.5 |
LMJ.RY0402.170439_1 | LMJ.RY0402.170439 | intron | 58 | 5.5 |
LMJ.RY0402.184326_1 | LMJ.RY0402.184326 | CDS | 95 | 5.5 |
LMJ.RY0402.184326_2 | LMJ.RY0402.184326 | CDS | 95 | 5.5 |
LMJ.RY0402.196194_1 | LMJ.RY0402.196194 | 5'UTR | 95 | 5.5 |
LMJ.RY0402.196194_2 | LMJ.RY0402.196194 | 5'UTR_intron | 95 | 5.5 |
LMJ.RY0402.203764_1 | LMJ.RY0402.203764 | intron | 58 | 5.5 |
LMJ.RY0402.255329_1 | LMJ.RY0402.255329 | intron | 73 | 5.5 |
PFAM: | PF00176, PF00271 |
PANTHER: | PTHR10799 PTHR10799:SF43 |
KEGG_ec: | 3.6.4.12 |
KEGG_orthology: | K14440 |
KOG: | KOG1000 |
Gene ontology terms:: | GO:0003677, GO:0005524, GO:0003676, GO:0004386 |
Best arabidopsis TAIR name: | AT1G48310.1 |
Best arabidopsis TAIR symbol: | CHA18,CHR18 |
Best arabidopsis TAIR defline: | chromatin remodeling factor18 |
Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
Cisplatin, screen 1 of 4 ( 95% confidence (FDR = 0.043)) |
Cisplatin, screen 2 of 4 ( 99% confidence (FDR = 0.0065)) |
Cisplatin, screen 3 of 4 ( 99% confidence (FDR = 0.0005)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.