Gene: Cre03.g199350

Overview

Common name:SRH9
Defline:
Description:
Synonyms:g4341.t1,SRH9
Chromosome:chromosome 3

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
LMJ.RY0402.083072_1 LMJ.RY0402.083072 CDS 73 5.5
LMJ.RY0402.090074_1 LMJ.RY0402.090074 intron 58 5.5
LMJ.RY0402.124580_1 LMJ.RY0402.124580 5'UTR 73 5.5
LMJ.RY0402.170439_1 LMJ.RY0402.170439 intron 58 5.5
LMJ.RY0402.184326_1 LMJ.RY0402.184326 CDS 95 5.5
LMJ.RY0402.184326_2 LMJ.RY0402.184326 CDS 95 5.5
LMJ.RY0402.196194_1 LMJ.RY0402.196194 5'UTR 95 5.5
LMJ.RY0402.196194_2 LMJ.RY0402.196194 5'UTR_intron 95 5.5
LMJ.RY0402.203764_1 LMJ.RY0402.203764 intron 58 5.5
LMJ.RY0402.255329_1 LMJ.RY0402.255329 intron 73 5.5

Gene Annotations

PFAM:PF00176, PF00271
PANTHER: PTHR10799 PTHR10799:SF43
KEGG_ec:3.6.4.12
KEGG_orthology:K14440
KOG:KOG1000
Gene ontology terms::GO:0003677, GO:0005524, GO:0003676, GO:0004386
Best arabidopsis TAIR name:AT1G48310.1
Best arabidopsis TAIR symbol:CHA18,CHR18
Best arabidopsis TAIR defline:chromatin remodeling factor18
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Cisplatin, screen 1 of 4 ( 95% confidence (FDR = 0.043))
Cisplatin, screen 2 of 4 ( 99% confidence (FDR = 0.0065))
Cisplatin, screen 3 of 4 ( 99% confidence (FDR = 0.0005))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.