| Common name: | ODC1 |
| Defline: | (1 of 2) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase; Ornithine decarboxylase 1 |
| Description: | Pyridoxal-dependent decarboxylase acting on ornithine to produce putrescine, first step in polyamine biosynthesis(PMID: 11950995); fully active, based on conservation of important residues (PMID: 16847581), in particular a conserved lysine residue which is known, in mouse ODC, to be the site of attachment of the pyridoxal-phosphate group, a stretch of three consecutive glycine residues that has been proposed to be part of a substrate-binding region; this is ODC1a, not the most abundant of the 4 splicing va |
| Synonyms: | g3265.t5,Cre03.g159500.t1.1,ODC1 |
| Chromosome: | chromosome 3 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.012913_1 | CLIP2.012913 | intron | 80 | 6.1 |
| CLIP2.012913_2 | CLIP2.012913 | intron | 80 | 6.1 |
| CLIP2.028412_1 | CLIP2.028412 | intron | 80 | 6.1 |
| CLIP2.028412_2 | CLIP2.028412 | intron | 80 | 6.1 |
| CLIP2.036837_1 | CLIP2.036837 | intron | 80 | 6.1 |
| CLIP2.036837_2 | CLIP2.036837 | intron | 80 | 6.1 |
| CLIP2.041133_1 | CLIP2.041133 | intron | 80 | 6.1 |
| CLIP2.041133_2 | CLIP2.041133 | intron | 80 | 6.1 |
| CLIP2.043334_1 | CLIP2.043334 | intron | 80 | 6.1 |
| CLIP2.043334_2 | CLIP2.043334 | intron | 80 | 6.1 |
| LMJ.RY0402.083560_1 | LMJ.RY0402.083560 | 3'UTR|outside_mRNA | 73 | 5.5 |
| LMJ.SG0182.007665_1 | LMJ.SG0182.007665 | MULTIPLE_SPLICE_VARIANTS | 75 | 5.3 |
| PFAM: | PF00278, PF02784 |
| PANTHER: | PTHR11482 PTHR11482:SF6 |
| KEGG_ec: | EC:4.1.1.17 |
| KEGG_orthology: | K01581 |
| KOG: | KOG0622 |
| Gene ontology terms:: | GO:0003824, GO:0006596 |
| Best arabidopsis TAIR name: | AT3G14390.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Pyridoxal-dependent decarboxylase family protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.