Gene: Cre06.g263550
Overview
| Common name: | LCI7,SELU1 |
| Defline: | SELU homolog; (1 of 1) PTHR28630//PTHR28630:SF3 - FAMILY NOT NAMED // REDOX-REGULATORY PROTEIN FAM213A |
| Description: | Similar to selenoprotein SELU, but lack selenocysteine residue; R53.5-related; low-CO2-inducible protein 7, regulated by CCM1 [PMID: 15235119]; identified in the flagellar and basal body proteome [PMID: 15137946] and upregulated by deflagellation |
| Synonyms: | g5921.t1,LCI7,Cre06.g263550.t1.1 |
| Chromosome: | chromosome 6 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC1E09
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
cytosol/cytosol (strong signal)
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.008909_1 | CLIP2.008909 | intron | 80 | 6.1 |
| CLIP2.008909_2 | CLIP2.008909 | intron | 80 | 6.1 |
| CLIP2.017778_1 | CLIP2.017778 | intron | 80 | 6.1 |
| CLIP2.017778_2 | CLIP2.017778 | intron | 80 | 6.1 |
| CLIP2.019081_1 | CLIP2.019081 | intron | 80 | 6.1 |
| CLIP2.019081_2 | CLIP2.019081 | intron | 80 | 6.1 |
| CLIP2.034416_1 | CLIP2.034416 | 5'UTR | 80 | 6.1 |
| CLIP2.034416_2 | CLIP2.034416 | 5'UTR | 80 | 6.1 |
| CLIP2.034827_1 | CLIP2.034827 | intron | 80 | 6.1 |
| CLIP2.034827_2 | CLIP2.034827 | intron | 80 | 6.1 |
| CLIP2.040054_1 | CLIP2.040054 | intron | 80 | 6.1 |
| CLIP2.040054_2 | CLIP2.040054 | intron | 80 | 6.1 |
| LMJ.RY0402.043458_1 | LMJ.RY0402.043458 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.057463_1 | LMJ.RY0402.057463 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.114947_1 | LMJ.RY0402.114947 | intron | 95 | 5.5 |
| LMJ.RY0402.114947_2 | LMJ.RY0402.114947 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | PF13911 |
| PANTHER: | PTHR28630 PTHR28630:SF3 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG4498 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT2G37240.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Thioredoxin superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.