Gene: Cre06.g292550 (Genome version: v5.5)
Overview
| Common name: | PP1C,PPP25,PP1A |
| Defline: | Serine/threonine protein phosphatase, metallo-dependent phosphat |
| Description: | Serine/threonine protein phosphatase 1 alpha (gi:5153113). Associated with flagellar axoneme [PMID: 10591628]; found in the flagellar proteome [PMID: 15998802]. A calcineurin-like phosphoesterase. Previously annotated as PP1A and PP1C |
| Synonyms: | g6778.t1,Cre06.g292550.t1.1,PP1A,PP1C,PPP25 |
| Chromosome: | chromosome_6 |
Protein Localization
A plasmid for expressing Cre06.g292550 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre06.g292550-Venus-3xFLAG
Imaged strain: CSI_LW09F6
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
|---|---|---|---|---|
| LMJ.RY0402.114443_2 | LMJ.RY0402.114443 | sense | 3'UTR | 58 |
| LMJ.RY0402.238772_1 | LMJ.RY0402.238772 | sense | 3'UTR | 73 |
Gene Annotations
| PFAM: | PF00149 |
| PANTHER: | PTHR11668 PTHR11668:SF136 |
| KEGG_ec: | 3.1.3.16 |
| KEGG_orthology: | K06269 |
| KOG: | KOG0374 |
| Gene ontology terms:: | GO:0016787 |
| Best arabidopsis TAIR name: | AT2G39840.1 |
| Best arabidopsis TAIR symbol: | TOPP4 |
| Best arabidopsis TAIR defline: | type one serine/threonine protein phosphatase 4 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.