Gene: Cre08.g372950
Overview
| Common name: | IDS1,IDS |
| Defline: | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; (1 of 1) 1.17.1.2 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase / HMBPP reductase |
| Description: | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (isopentenyl diphosphate/dimethylallyl diphosphate synthase) (ispH) (lytB) [PMID:11004185]; chloroplast precursor |
| Synonyms: | IDS1,g8734.t1,IDS,Cre08.g372950.t1.1 |
| Chromosome: | chromosome 8 |
Protein Localization
A plasmid for expressing Cre08.g372950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre08.g372950-Venus-3xFLAG
Imaged strain: CSI_LW08C1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/a few medium puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001182_1 | CLIP2.001182 | CDS | 63 | 6.1 |
| CLIP2.002915_1 | CLIP2.002915 | 3'UTR | 80 | 6.1 |
| CLIP2.002915_2 | CLIP2.002915 | 3'UTR | 80 | 6.1 |
| CLIP2.004377_1 | CLIP2.004377 | 3'UTR | 80 | 6.1 |
| CLIP2.005915_1 | CLIP2.005915 | 3'UTR | 63 | 6.1 |
| CLIP2.006869_1 | CLIP2.006869 | intron | 40 | 6.1 |
| LMJ.RY0402.045820_1 | LMJ.RY0402.045820 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.045820_2 | LMJ.RY0402.045820 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF02401 |
| PANTHER: | PTHR31619 PTHR31619:SF2 |
| KEGG_ec: | EC:1.17.1.2 |
| KEGG_orthology: | K03527 |
| KOG: | |
| Gene ontology terms:: | GO:0019288, GO:0046872, GO:0050992, GO:0051745 |
| Best arabidopsis TAIR name: | AT4G34350 |
| Best arabidopsis TAIR symbol: | CLB6,HDR,ISPH |
| Best arabidopsis TAIR defline: | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.