Gene: Cre12.g484200
Overview
| Common name: | GGPS,PPS2,GGPS1 |
| Defline: | Geranylgeranyl pyrophosphate synthase, putative chloroplast precursor; (1 of 1) 2.5.1.29 - Geranylgeranyl diphosphate synthase / Geranylgeranyl-PP synthetase |
| Description: | polyprenyl synthetase (geranylgeranyl diphosphate synthase) (GGPPS); Low-CO2 inducible gene LCI14 revealed by cDNA array analyses; regulated by CCM1 [PMID: 15235119] |
| Synonyms: | GGPS,PPS2,g12018.t1,Cre12.g484200.t1.1,GGPS1 |
| Chromosome: | chromosome 12 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC1A05
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.039750_3 | CLIP2.039750 | 3'UTR | 80 | 6.1 |
| CLIP2.039750_4 | CLIP2.039750 | 3'UTR | 80 | 6.1 |
| CLIP2.059497_1 | CLIP2.059497 | 3'UTR | 80 | 6.1 |
| CLIP2.059497_2 | CLIP2.059497 | 3'UTR | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00348 |
| PANTHER: | PTHR12001 PTHR12001:SF52 |
| KEGG_ec: | EC:2.5.1.29 |
| KEGG_orthology: | K13789 |
| KOG: | KOG0776 |
| Gene ontology terms:: | GO:0008299 |
| Best arabidopsis TAIR name: | AT4G36810 |
| Best arabidopsis TAIR symbol: | GGPS1 |
| Best arabidopsis TAIR defline: | geranylgeranyl pyrophosphate synthase 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.