Gene: Cre12.g490500
Overview
| Common name: | LCAA1,YCF54,CGL78 |
| Defline: | (1 of 1) PF10674 - Protein of unknown function (DUF2488) (Ycf54); Magnesium protoporphyrin IX monomethyl ester oxidative cyclase, YCF54 subunit |
| Description: | YCF54 subunit of the aerobic oxidative cyclase; Homolog to chloroplast-localized LCAA/Ycf54 of Arabidopsis; Conserved in the Green Lineage; Target of CRR1 |
| Synonyms: | CGL78,Cre12.g490500.t1.1,YCF54,g12175.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g490500 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g490500-Venus-3xFLAG
Imaged strain: CSI_LW01G7
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched in thylakoid
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001233_1 | CLIP2.001233 | 3'UTR | 80 | 6.1 |
| CLIP2.001233_2 | CLIP2.001233 | 3'UTR | 80 | 6.1 |
Gene Annotations
| PFAM: | PF10674 |
| PANTHER: | PTHR35319 PTHR35319:SF2 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G58250 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | (1 of 1) PF10674 - Protein of unknown function (DUF2488) (Ycf54) |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.