Gene: Cre12.g513950
Overview
| Common name: | SUFD1,SUF4,SUFD |
| Defline: | Iron-sulfur cluster assembly protein; (1 of 1) K09015 - Fe-S cluster assembly protein SufD (sufD) |
| Description: | putative ABC transporter involved in Fe-S cluster assembly, permease protein, homologous Arabidopsis protein Nap6 localized to plastid |
| Synonyms: | g12687.t1,SUF4,SUFD,Cre12.g513950.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g513950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g513950-Venus-3xFLAG
Imaged strain: CSI_LW07F5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.004112_1 | CLIP2.004112 | 3'UTR | 40 | 6.1 |
| CLIP2.004457_1 | CLIP2.004457 | 3'UTR | 80 | 6.1 |
| CLIP2.004457_2 | CLIP2.004457 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.063554_1 | LMJ.RY0402.063554 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.063554_2 | LMJ.RY0402.063554 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.136352_1 | LMJ.RY0402.136352 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.136352_2 | LMJ.RY0402.136352 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.167212_1 | LMJ.RY0402.167212 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF01458 |
| PANTHER: | PTHR30508 PTHR30508:SF3 |
| KEGG_ec: | |
| KEGG_orthology: | K09015 |
| KOG: | |
| Gene ontology terms:: | GO:0016226 |
| Best arabidopsis TAIR name: | AT1G32500 |
| Best arabidopsis TAIR symbol: | ATNAP6,NAP6 |
| Best arabidopsis TAIR defline: | non-intrinsic ABC protein 6 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.