Gene: Cre12.g544150
Overview
| Common name: | CYN20-2,CYN7,TLP2,NSG1,CYN20B |
| Defline: | (1 of 4) K03768 - peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] (PPIB, ppiB); Cyclophilin 20-2 |
| Description: | Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin type; similar to AtCYP20-2 (TLP2); possibly directed to chloroplast thylakoid lumen; linked to CYN20-6 and CYN13 |
| Synonyms: | CYN7,CYN20-2,TLP2,NSG1,Cre12.g544150.t1.1,g13679.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g544150 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g544150-Venus-3xFLAG
Imaged strain: CSI_LW06D4
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/pyrenoid/pyrenoid traversing enriched
chloroplast/not homogeneous/enriched in thylakoid
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.000005_1 | CLIP2.000005 | CDS | 80 | 6.1 |
| CLIP2.000005_2 | CLIP2.000005 | CDS | 80 | 6.1 |
| CLIP2.000014_1 | CLIP2.000014 | CDS | 80 | 6.1 |
| CLIP2.000014_2 | CLIP2.000014 | CDS | 80 | 6.1 |
| CLIP2.000021_1 | CLIP2.000021 | CDS | 80 | 6.1 |
| CLIP2.000021_2 | CLIP2.000021 | CDS | 80 | 6.1 |
| CLIP2.000043_1 | CLIP2.000043 | CDS | 80 | 6.1 |
| CLIP2.000043_2 | CLIP2.000043 | CDS | 80 | 6.1 |
| CLIP2.000528_1 | CLIP2.000528 | CDS | 80 | 6.1 |
| CLIP2.000528_2 | CLIP2.000528 | CDS | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00160 |
| PANTHER: | PTHR11071 |
| KEGG_ec: | EC:5.2.1.8 |
| KEGG_orthology: | K03768 |
| KOG: | KOG0880 |
| Gene ontology terms:: | GO:0000413, GO:0003755, GO:0006457 |
| Best arabidopsis TAIR name: | AT5G13120.1 |
| Best arabidopsis TAIR symbol: | ATCYP20-2,CYP20-2 |
| Best arabidopsis TAIR defline: | cyclophilin 20-2 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.