Gene: Cre12.g549350
Overview
| Common name: | |
| Defline: | |
| Description: | null-allele mutant was isolated (PMID 29743196) |
| Synonyms: | g13561.t1,Cre12.g549350.t1.1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g549350 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g549350-Venus-3xFLAG
Imaged strain: CSI_LW04H6
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/pyrenoid depleted/enriched in thylakoid
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre01.g050950 | CHLP1,CHLP,LYL1 | Cre12.g549350 | Wang et al. 2023 | |
| Cre14.g626700 | PETF,FDX1 | Cre12.g549350 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002163_1 | CLIP2.002163 | 3'UTR | 80 | 6.1 |
| CLIP2.002163_2 | CLIP2.002163 | 3'UTR | 80 | 6.1 |
| CLIP2.003443_1 | CLIP2.003443 | intron | 80 | 6.1 |
| CLIP2.003443_2 | CLIP2.003443 | intron | 80 | 6.1 |
| CLIP2.004564_1 | CLIP2.004564 | intron | 80 | 6.1 |
| CLIP2.004564_2 | CLIP2.004564 | intron | 80 | 6.1 |
| CLIP2.004582_1 | CLIP2.004582 | 5'UTR | 80 | 6.1 |
| CLIP2.004582_2 | CLIP2.004582 | 5'UTR | 80 | 6.1 |
| CLIP2.005927_1 | CLIP2.005927 | 3'UTR | 80 | 6.1 |
| CLIP2.005927_2 | CLIP2.005927 | 3'UTR | 80 | 6.1 |
| CLIP2.007630_1 | CLIP2.007630 | CDS | 80 | 6.1 |
| LMJ.RY0402.077573_1 | LMJ.RY0402.077573 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.