Gene: Cre12.g552900
Overview
| Common name: | DOI1,LIS1 |
| Defline: | outer arm dynein interacting protein; (1 of 24) IPR001680//IPR017986//IPR020472 - WD40 repeat // WD40-repeat-containing domain // G-protein beta WD-40 repeat |
| Description: | WD protein related to Lis1 controls flagellar power output. Lacks LisH domain; null-allele mutant was isolated (PMID 29743196) |
| Synonyms: | LIS1,Cre12.g552900.t1.1,g13480.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g552900 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g552900-Venus-3xFLAG
Imaged strain: CSI_LW05F5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
centrosome or flagella/base of flagella
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.033552_1 | CLIP2.033552 | outside_mRNA | 80 | 6.1 |
| CLIP2.037781_1 | CLIP2.037781 | intron | 80 | 6.1 |
| CLIP2.037781_2 | CLIP2.037781 | intron | 80 | 6.1 |
| CLIP2.043543_1 | CLIP2.043543 | intron | 80 | 6.1 |
| CLIP2.043543_2 | CLIP2.043543 | intron | 80 | 6.1 |
| CLIP2.045311_1 | CLIP2.045311 | CDS | 80 | 6.1 |
| CLIP2.047088_1 | CLIP2.047088 | CDS | 80 | 6.1 |
| CLIP2.047088_2 | CLIP2.047088 | CDS | 80 | 6.1 |
| CLIP2.050156_1 | CLIP2.050156 | intron | 80 | 6.1 |
| CLIP2.050156_2 | CLIP2.050156 | intron | 80 | 6.1 |
| CLIP2.052845_1 | CLIP2.052845 | intron | 80 | 6.1 |
| CLIP2.052845_2 | CLIP2.052845 | intron | 80 | 6.1 |
| LMJ.RY0402.069660_1 | LMJ.RY0402.069660 | CDS | 58 | 5.5 |
| LMJ.RY0402.094992_1 | LMJ.RY0402.094992 | intron | 73 | 5.5 |
| LMJ.RY0402.125201_1 | LMJ.RY0402.125201 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.134241_1 | LMJ.RY0402.134241 | intron | 95 | 5.5 |
| LMJ.RY0402.134241_2 | LMJ.RY0402.134241 | intron | 95 | 5.5 |
| LMJ.RY0402.183269_1 | LMJ.RY0402.183269 | CDS | 73 | 5.5 |
| LMJ.RY0402.209209_1 | LMJ.RY0402.209209 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.209209_2 | LMJ.RY0402.209209 | 5'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00400 |
| PANTHER: | PTHR22847 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG0266 |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT3G49660.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Transducin/WD40 repeat-like superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.