Gene: Cre13.g606750 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:g14628.t1
Chromosome:chromosome_13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.043751_2 LMJ.RY0402.043751 sense CDS 73
LMJ.RY0402.044179_1 LMJ.RY0402.044179 sense CDS 95
LMJ.RY0402.044179_2 LMJ.RY0402.044179 sense CDS 95
LMJ.RY0402.051464_1 LMJ.RY0402.051464 antisense CDS 95
LMJ.RY0402.051464_2 LMJ.RY0402.051464 antisense CDS 95
LMJ.RY0402.052823_1 LMJ.RY0402.052823 sense CDS 95
LMJ.RY0402.052823_2 LMJ.RY0402.052823 antisense CDS 95
LMJ.RY0402.054678_1 LMJ.RY0402.054678 sense CDS 95
LMJ.RY0402.054678_2 LMJ.RY0402.054678 sense CDS 95
LMJ.RY0402.068009_2 LMJ.RY0402.068009 sense CDS 58
LMJ.RY0402.068009_3 LMJ.RY0402.068009 antisense CDS 58
LMJ.RY0402.084163_1 LMJ.RY0402.084163 sense intron 73
LMJ.RY0402.090941_1 LMJ.RY0402.090941 antisense CDS 95
LMJ.RY0402.090941_2 LMJ.RY0402.090941 antisense CDS 95
LMJ.RY0402.094907_1 LMJ.RY0402.094907 sense CDS 95
LMJ.RY0402.094907_2 LMJ.RY0402.094907 sense CDS 95
LMJ.RY0402.104256_1 LMJ.RY0402.104256 antisense CDS 95
LMJ.RY0402.104256_2 LMJ.RY0402.104256 antisense CDS 95
LMJ.RY0402.106646_1 LMJ.RY0402.106646 antisense CDS 95
LMJ.RY0402.106646_2 LMJ.RY0402.106646 sense CDS 95
LMJ.RY0402.115219_2 LMJ.RY0402.115219 antisense CDS 73
LMJ.RY0402.121776_2 LMJ.RY0402.121776 sense CDS 95
LMJ.RY0402.121776_3 LMJ.RY0402.121776 sense CDS 95
LMJ.RY0402.132940_3 LMJ.RY0402.132940 antisense CDS 73
LMJ.RY0402.133727_2 LMJ.RY0402.133727 antisense CDS 73
LMJ.RY0402.138761_1 LMJ.RY0402.138761 antisense CDS 95
LMJ.RY0402.138761_2 LMJ.RY0402.138761 antisense CDS 95
LMJ.RY0402.138761_3 LMJ.RY0402.138761 antisense CDS 95
LMJ.RY0402.144672_1 LMJ.RY0402.144672 antisense CDS 73
LMJ.RY0402.147194_1 LMJ.RY0402.147194 antisense CDS 95
LMJ.RY0402.147194_2 LMJ.RY0402.147194 sense CDS 95
LMJ.RY0402.153541_1 LMJ.RY0402.153541 sense CDS 73
LMJ.RY0402.155777_2 LMJ.RY0402.155777 sense CDS 73
LMJ.RY0402.157612_1 LMJ.RY0402.157612 sense intron 95
LMJ.RY0402.157612_2 LMJ.RY0402.157612 sense intron 95
LMJ.RY0402.176068_2 LMJ.RY0402.176068 antisense intron 73
LMJ.RY0402.179569_1 LMJ.RY0402.179569 antisense CDS 95
LMJ.RY0402.179569_2 LMJ.RY0402.179569 antisense CDS 95
LMJ.RY0402.180187_3 LMJ.RY0402.180187 sense CDS 73
LMJ.RY0402.183736_2 LMJ.RY0402.183736 sense CDS 73
LMJ.RY0402.191995_3 LMJ.RY0402.191995 antisense CDS 73
LMJ.RY0402.208598_2 LMJ.RY0402.208598 sense CDS 95
LMJ.RY0402.208598_3 LMJ.RY0402.208598 sense CDS 95
LMJ.RY0402.213282_1 LMJ.RY0402.213282 sense CDS 73
LMJ.RY0402.216553_2 LMJ.RY0402.216553 sense CDS 73
LMJ.RY0402.230072_1 LMJ.RY0402.230072 sense intron 58
LMJ.RY0402.232949_3 LMJ.RY0402.232949 sense CDS 73
LMJ.RY0402.234602_1 LMJ.RY0402.234602 sense CDS 73
LMJ.RY0402.248166_2 LMJ.RY0402.248166 sense CDS 95
LMJ.RY0402.248166_3 LMJ.RY0402.248166 sense CDS 95
LMJ.RY0402.255325_1 LMJ.RY0402.255325 sense CDS 58

Gene Annotations

PFAM:PF00023, PF00642
PANTHER: PTHR12447
KEGG_ec:
KEGG_orthology:
KOG:KOG3227
Gene ontology terms::GO:0005515, GO:0003676, GO:0008270
Best arabidopsis TAIR name:AT2G35430.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Zinc finger C-x8-C-x5-C-x3-H type family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

High light in oxic environment, screen 1 of 1 ( 71% confidence (FDR = 0.29))
LAT034H07, screen 1 of 1 ( 93% confidence (FDR = 0.061))
LAT035F03, screen 1 of 1 ( 99% confidence (FDR = 0.00059))
LAT035H07, screen 1 of 1 ( 92% confidence (FDR = 0.076))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.

Gene: Cre13.g606750 (Genome version: v5.3)

Overview

Common name:
Defline:
Description:
Synonyms:Cre13.g606750,g14628
Chromosome:chromosome_13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.SG0182.006946_1 LMJ.SG0182.006946 sense CDS 75
LMJ.SG0182.007561_1 LMJ.SG0182.007561 sense CDS 75
LMJ.SG0182.016635_1 LMJ.SG0182.016635 antisense CDS 75

Gene Annotations

PFAM:PF00023, PF00642
PANTHER: PTHR12447
KEGG_ec:
KEGG_orthology:
KOG:KOG3227
Gene ontology terms::
Best arabidopsis TAIR name:AT2G35430.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Zinc finger C-x8-C-x5-C-x3-H type family protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.