Gene: Cre16.g666000
Overview
| Common name: | |
| Defline: | (1 of 1) K13151 - snurportin-1 (SNUPN, RNUT1) |
| Description: | |
| Synonyms: | g16073.t1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g666000 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g666000-Venus-3xFLAG
Imaged strain: CSI_LW06G8
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.011153_1 | CLIP2.011153 | CDS | 80 | 6.1 |
| CLIP2.028542_1 | CLIP2.028542 | intron | 80 | 6.1 |
| CLIP2.028542_2 | CLIP2.028542 | intron | 80 | 6.1 |
| CLIP2.037207_1 | CLIP2.037207 | CDS | 80 | 6.1 |
| CLIP2.048810_1 | CLIP2.048810 | intron | 80 | 6.1 |
| CLIP2.048810_2 | CLIP2.048810 | intron | 80 | 6.1 |
| CLIP2.051700_1 | CLIP2.051700 | intron | 80 | 6.1 |
| CLIP2.060062_1 | CLIP2.060062 | 3'UTR | 80 | 6.1 |
| CLIP2.062610_1 | CLIP2.062610 | intron | 63 | 6.1 |
| LMJ.RY0402.040871_1 | LMJ.RY0402.040871 | intron | 73 | 5.5 |
| LMJ.RY0402.054231_1 | LMJ.RY0402.054231 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.126906_1 | LMJ.RY0402.126906 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.142394_1 | LMJ.RY0402.142394 | CDS | 73 | 5.5 |
| LMJ.RY0402.234955_1 | LMJ.RY0402.234955 | intron | 95 | 5.5 |
| LMJ.RY0402.234955_2 | LMJ.RY0402.234955 | intron | 95 | 5.5 |
| LMJ.RY0402.236606_1 | LMJ.RY0402.236606 | intron | 95 | 5.5 |
| LMJ.RY0402.236606_2 | LMJ.RY0402.236606 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | PTHR13403 PTHR13403:SF6 |
| KEGG_ec: | |
| KEGG_orthology: | K13151 |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G24880 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | (1 of 1) PTHR13403 - SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.