Insertion junction: CLIP2.048810_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.048810
Chromosome:chromosome 16
Location:3252066
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g666000 (1 of 1) K13151 - snurportin-1 (SNUPN, RNUT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTGCACGCTAAGTGTTTGGCTGAGTAAAGGCAGGATGCGGGACTGGT
Internal bar code:GGCCGTCGTAGGTGGTGCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:985
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CACACACTTGTACGGTTGCG
Suggested primer 2:ATTGCAAGTACGGGGTGTGT