Insertion junction: CLIP2.000008_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000008
Chromosome:chromosome 6
Location:939349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256300 PPP20,PBCP2,PBCP-LIKE (1 of 9) PF07228 - Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGGCGGGAATGCTTGCGGCGGTGTCGGTGGGAGGTGACAGCGGCTGCA
Internal bar code:ATTCAAATGTAAGTACTCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1451
LEAP-Seq percent confirming:86.8421
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACTGCGACAGAGGAGT
Suggested primer 2:TTGGCTTACTTGGCGGATGT