Insertion junction: CLIP2.000008_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000008
Chromosome:chromosome 6
Location:939352
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256300 PPP20,PBCP2,PBCP-LIKE (1 of 9) PF07228 - Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTTCCATACTGCTCGAGAGTGTAGCGTCGCATCACGGCCGTGTGCCGC
Internal bar code:ATTCAAATGTAAGTACTCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1722
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCTTACTTGGCGGATGT
Suggested primer 2:CAACACTGCGACAGAGGAGT