Insertion junction: CLIP2.000016_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000016
Chromosome:chromosome 10
Location:1167839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g425750 (1 of 1) PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 CDS
lncRNA_TCONS_00063058 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGGTAAGGCTCCATGGGCCTAACGTCGCCCAACGCTCACGAAATCCAC
Internal bar code:TTTGCCACTCGATGTTCCGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:361
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGAGATGGGAGGAGGGAC
Suggested primer 2:CCCAATGCACTTCCCCTGAT