Insertion junction: CLIP2.000019_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000019
Chromosome:chromosome 10
Location:3887677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446350 CGLD14 Conserved in the Green Lineage and Diatoms; (1 of 1) PTHR31407//PTHR31407:SF17 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 3, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCCGGTATGGCCGATCCAGGCGCCCGGCGGACGCTGGCTTGGTTCCCG
Internal bar code:AACGAACCACAGTCTTGGTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1453
LEAP-Seq percent confirming:97.1429
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TCACATCCAACCCTGCTGTC
Suggested primer 2:ACGATCATCGCTCCATGGTC