Insertion junction: CLIP2.000025_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000025
Chromosome:chromosome 9
Location:6505509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g415600 (1 of 5) 3.2.1.3 - Glucan 1,4-alpha-glucosidase / Lysosomal alpha-glucosidase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGCTGGCGGACTGGCGGACACGCCTGGGCAGCCAATAGCGTGAGGGAG
Internal bar code:TCCGCGAAAGCACATTTCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1824
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:72
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:75

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAAGCTGTCCAAGTTGCC
Suggested primer 2:TTCCATACGGCCTTGCATGT