Insertion junction: CLIP2.000026_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000026
Chromosome:chromosome 12
Location:1770806
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485850 CPLD64 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF06916 - Protein of unknown function (DUF1279) (DUF1279) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGCGCTCACGCCCGTGGTCGCCAAGTACCTGGGCAAGAAGAAGGAGGA
Internal bar code:CTTAGCGGACTAGTGTCACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:298
LEAP-Seq percent confirming:0.952381
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:104
LEAP-Seq n unique pos:105

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCTCCGCAGCCTCATAG
Suggested primer 2:ACCTGAGGTGTATGTGCAGC