Insertion junction: CLIP2.000026_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000026
Chromosome:chromosome 12
Location:1770810
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485850 CPLD64 Conserved in the Plant Lineage and Diatoms; (1 of 2) PF06916 - Protein of unknown function (DUF1279) (DUF1279) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACAGTGGGCGGGAAGCGCACCGGCGACAGCGCCTTGTGCGCGGCGTAG
Internal bar code:CTACTCAAAGACGTACAGTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2959
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:80
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGAGGTGTATGTGCAGC
Suggested primer 2:CTGTCTCCGCAGCCTCATAG