Insertion junction: CLIP2.000029_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000029
Chromosome:chromosome 10
Location:2947057
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g440050 CSP41A,Csp41a,SNE12,RAP41 (1 of 1) PTHR10366//PTHR10366:SF278 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC; Chloroplast stem-loop-binding protein 41a intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTGCTGCCGGCGTGCAGCACATGCGGGCACCAGGACGGCGGTTGCGG
Internal bar code:GCGTAGAGGTCCTAGTCGCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:764
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTAGTCGTTGACCAGGCC
Suggested primer 2:TCACCACTTCCCTCTCGCTA