Insertion junction: CLIP2.000033_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000033
Chromosome:chromosome 3
Location:7355030
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g206550 CPLD2,PGP5 (1 of 2) PTHR18901//PTHR18901:SF9 - 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2 // SUBFAMILY NOT NAMED; conserved expressed protein with hydrolase motif 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACCAGAATGCGCTTGAGTGGCACGAAACGCCCCGCACTGCTGAAGCC
Internal bar code:CCCAAAGGCTCAGGTCACGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3778
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:60
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCATATTCGCGAGCTGC
Suggested primer 2:CATGTCAGCTTCCTCTGCCA