Insertion junction: CLIP2.000039_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000039
Chromosome:chromosome 3
Location:2801313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g161800 MDN1 (1 of 1) K14572 - midasin (MDN1, REA1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCAGCCACTCCGCACTCACCCTCCACCTCCTTGGTCTCGTCCGGCACG
Internal bar code:CCTGGTTGAAAACGTTTTTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:467
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGACGGCGCCCTAATGG
Suggested primer 2:TCCACAGCTTCTCGTCAACC