Insertion junction: CLIP2.000046_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000046
Chromosome:chromosome 6
Location:5916466
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289850 SBE1 (1 of 3) 2.4.1.18 - 1,4-alpha-glucan branching enzyme / Glycogen branching enzyme; Starch Branching Enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACTCGGTTTGGTTTTATCAGAATGCAACGCCCGCGGGTTCTAGTCTT
Internal bar code:CCTTGTCAGGGATCTTACTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:182
LEAP-Seq percent confirming:56.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGGCAACAGGAGACTCG
Suggested primer 2:CGGGCTTTCGTTTCGTGTTT