Insertion junction: CLIP2.000046_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000046
Chromosome:chromosome 6
Location:5916470
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g289850 SBE1 (1 of 3) 2.4.1.18 - 1,4-alpha-glucan branching enzyme / Glycogen branching enzyme; Starch Branching Enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTAGTCACAGCAAAAGCAGTCACAGAGCCCCGCCGCGACCGCCTTTGA
Internal bar code:CTCAAATTTCACGATAGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2308
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCTTTCGTTTCGTGTTT
Suggested primer 2:AACAGGCAACAGGAGACTCG