Insertion junction: CLIP2.000049_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000049
Chromosome:chromosome 17
Location:1366312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCTGGACGCCAACGACCCACAGTGCGCCGGGGAGGGAGAGATGCCGT
Internal bar code:GTGCATTTAATGTACGCACAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2206
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACGGGCGTTAGTCCTAC
Suggested primer 2:TTCACTTTGCGTTCATGCCG