Insertion junction: CLIP2.000053_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.000053
Chromosome:chromosome 9
Location:2084253
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396250 VTE5 Phosphatidate cytidylyltransferase; (1 of 1) K18678 - phytol kinase (VTE5) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAGGACGCAACGGGGGCGGCTGCGGCTGACGTCCTTTGGCGACTGCAA
Internal bar code:GCTCTGCGAGGAAAAGTTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1458
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTTCCTCCTGTCCTAGCC
Suggested primer 2:GCCCAAACTGAACCGAAACC