Insertion junction: CLIP2.000060_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000060
Chromosome:chromosome 6
Location:936875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256300 PPP20,PBCP2,PBCP-LIKE (1 of 9) PF07228 - Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGCGCCTACAGCCAGACCACCGTGCGCGGCAGCTCCACGGCCTGCGT
Internal bar code:GCCTTGAAGGGTTCGCTTCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTAACGCTTTGCTCTC
Suggested primer 2:TGTGCAGTTTGGTAAAGCGC