Insertion junction: CLIP2.000069_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000069
Chromosome:chromosome 11
Location:2167323
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467737 (1 of 1) PTHR18937//PTHR18937:SF160 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGCGGTGCTGAATCTCGGTGCTCACCTGGAGACACGTCGGCCGCGA
Internal bar code:GGAGCTTTTGCCTGCCATAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3473
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGGTCTGGTTCGTGAG
Suggested primer 2:ACATGGGGCTATACTGCAGC