Insertion junction: CLIP2.000073_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000073
Chromosome:chromosome 16
Location:927826
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648350 PDY2 (1 of 2) 1.5.5.2 - Proline dehydrogenase; Proline dehydrogenase 3'UTR
Cre16.g648400 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAATATAACCGTGTGCACACAGTGGGTGCGCCTGAGATACGTCGGCCAC
Internal bar code:TATTGGTACTCCAAAAACTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2535
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAGATTGCGCTGCATGAC
Suggested primer 2:TGACGCTGCTGAGAAGAGTG