Insertion junction: CLIP2.000074_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000074
Chromosome:chromosome 3
Location:2330936
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158050 PPP11 (1 of 1) PF00686//PF07228 - Starch binding domain (CBM_20) // Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTGGCACCCTCCGGGAGTCGCCGCACGATATGTCCAAGCGGTTTATC
Internal bar code:AACCGCGCCTATACGGTACTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2128
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGTTGACGTAGGGAGCTA
Suggested primer 2:ACACTAAAGCCAGGGACACG