Insertion junction: CLIP2.000076_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000076
Chromosome:chromosome 6
Location:933195
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256250 TEF14 Thylakoid lumenal protein; (1 of 1) PTHR35742//PTHR35742:SF1 - FAMILY NOT NAMED // THYLAKOID LUMENAL 16.5 KDA PROTEIN, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAGCCCAGTCGAGGGGTCATCCGCACGCGGCCTGGCCCCGCTTCGCC
Internal bar code:CTATGGGCTGATGCTTAGATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1842
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACGGACAACCTTTCCAG
Suggested primer 2:GCGGATTCAGTGTGGTGGTA