Insertion junction: CLIP2.000077_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000077
Chromosome:chromosome 8
Location:2752217
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre08.g373450 SBE4 (1 of 1) 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase; Starch Branching Enzyme 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCGGCGACCTAGACCTACTGGGCAGTGCCGGCAGCGGCCTGGAGGA
Internal bar code:TACAGCAGGGGTATGGAATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:772
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCGTGTCAGCAATGTGT
Suggested primer 2:CTAGCTAGTCGCGTGTCTGG