Insertion junction: CLIP2.000080_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000080
Chromosome:chromosome 7
Location:2876882
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332300 GWD2,1 Alpha-glucan water dikinase 2; (1 of 3) 2.7.9.4 - Alpha-glucan, water dikinase / Starch-related R1 protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCTGCCCTCCAAGCGCACGGCGCTGCGGGCGCCCGGCGCCGCCACCC
Internal bar code:ATGTTTGGTTCGAGAAGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:446
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTAAAGCCATACAGCGC
Suggested primer 2:AACTACTCGTTCGTGCTGCA