Insertion junction: CLIP2.000080_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000080
Chromosome:chromosome 7
Location:2876883
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g332300 GWD2,1 Alpha-glucan water dikinase 2; (1 of 3) 2.7.9.4 - Alpha-glucan, water dikinase / Starch-related R1 protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCAGCGTGGGGCCGGCACCTGGGAGACAGGCAGGGTGGGGCAGGGGGG
Internal bar code:ATGTTTGGTTCGAGAAGTAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:438
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AACTACTCGTTCGTGCTGCA
Suggested primer 2:GCACTAAAGCCATACAGCGC