Insertion junction: CLIP2.000095_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000095
Chromosome:chromosome 2
Location:8246606
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g143550 ELIP3,ELI4,ELI3,LCI16 Early light-induced LHC-like protein; (1 of 6) PTHR14154:SF5 - EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGATAGTCAGGTTGTAGTTCTCCACGGTTTTCTGCAGCGGTAGAATTA
Internal bar code:ATGGTCACACCAGAACACCGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1941
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCGTTGCCCCAAAATGC
Suggested primer 2:CTGCCTAGAACGCGACCTAG