Insertion junction: CLIP2.000103_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000103
Chromosome:chromosome 1
Location:1581724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008550 (1 of 2) PTHR24058//PTHR24058:SF23 - DUAL SPECIFICITY PROTEIN KINASE // SERINE/THREONINE KINASE-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGCCTCAACGACAAAAATGCGAACAGCTCCAGAACAAGGAAACCTAAG
Internal bar code:CGTCAGTCGACGCACCGGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:538
LEAP-Seq percent confirming:46.1538
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGCAAGATGAAGCAGC
Suggested primer 2:CAAACCAGCTGCTGTTGTCC