Insertion junction: CLIP2.000111_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000111
Chromosome:chromosome 4
Location:1435059
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214200 (1 of 30) IPR000253 - Forkhead-associated (FHA) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGACACTCTCAATCGTTCTGCACAAAGCGTGCAGGTGCCACGCAAGC
Internal bar code:TGGTGATCGAAGTGATCGTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:425
LEAP-Seq percent confirming:97.6744
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGCAGGAAAGAACGCGC
Suggested primer 2:CGTCCCTACACACACATGCT