Insertion junction: CLIP2.000116_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.000116
Chromosome:chromosome 1
Location:1576345
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g008550 (1 of 2) PTHR24058//PTHR24058:SF23 - DUAL SPECIFICITY PROTEIN KINASE // SERINE/THREONINE KINASE-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAATCATACGGGAGGCCAATGGAGGCGTGGCCCGCCCTGACTCCCCC
Internal bar code:GTGCAGTCTTGGACAAAGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1342
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:71

Suggested primers for confirmation by PCR

Suggested primer 1:GTTATTGCTTAAGCGCGCGA
Suggested primer 2:CCTCATCCTCGTCGGACATG