Insertion junction: CLIP2.000119_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.000119
Chromosome:chromosome 12
Location:1693873
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486300 PSAL,PSAL1 (1 of 1) K02699 - photosystem I subunit XI (psaL); Photosystem I reaction center subunit L intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGGGGGAGAGGGTCAGCCACCCCTCTCGCTGTGCCCCTCGTATGTGA
Internal bar code:ATTTCCACTGCCCTCCCGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:215
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:215

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGTTGTAGGAGGGGGAG
Suggested primer 2:CCACCTACCTGAGCAACCTG