Insertion junction: CLIP2.000125_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000125
Chromosome:chromosome 1
Location:5614858
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g040050 TPK1 (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80); Thiamine pyrophosphokinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACATGAGCACGTCTGCCCGGGGCCCGTCCGCCTACCTGGGGCTATCGGC
Internal bar code:TAGAGTATTCCTTGCGTATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:372
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAGACGGGTTAGGCGTA
Suggested primer 2:GACCCAAGAAGTCCGAGCAA