Insertion junction: CLIP2.000126_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.000126
Chromosome:chromosome 9
Location:3193151
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g394547 (1 of 3) 2.4.1.19 - Cyclomaltodextrin glucanotransferase / Cyclodextrin glycosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCTCGCGCTCCATCTCCTCCAGCTTGGCGGCCAAGAAGTTCACCTGG
Internal bar code:AGTAGAGTGGTACGCCACGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1041
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GATGGGTTTGACGGTGGGAT
Suggested primer 2:ACCGTACCACAAACTCCGTC