Insertion junction: CLIP2.000139_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.000139
Chromosome:chromosome 16
Location:639900
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691800 FLVB1,FLVB (1 of 2) 1.5.3.22 - Coenzyme F420H(2) oxidase; Thylakoid flavodiiron protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAATGGCTACCTCCCCCGCTCTAGTTTCTTCTTGGCAAAGGCGAGCGC
Internal bar code:TGAAATGAGTTCAGACTTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:227
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACCTCCATCACCTCAC
Suggested primer 2:AGGCCCACATGAAACGAGAG