Insertion junction: CLIP2.000141_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000141
Chromosome:chromosome 6
Location:6348476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g293100 (1 of 2) PTHR19957:SF124 - SYNTAXIN-8B-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTAAAGAGCTGCTACAGCGCGTCTTTGCTACCTGCTCGTCGATGTCC
Internal bar code:TAGGCTTGCATACAGTCGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:711
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTTGCTGCTGGGGATGAA
Suggested primer 2:TGTGCGGTAGTCAGTGTCAC