Insertion junction: CLIP2.000151_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.000151
Chromosome:chromosome 17
Location:5666728
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g740261 FAP365 (1 of 96) IPR019734 - Tetratricopeptide repeat; Flagellar Associated Protein 365 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAACATATGATAAGCGAAATAATGCAGCAGCAATGTTACAGCAAGCGGC
Internal bar code:CTTAGCGAACTGTTTATGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:661
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAAAGTGTTTGGGCCCATGG
Suggested primer 2:GTGAGGTGGAGAGGTGGTTG