Insertion junction: CLIP2.000153_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000153
Chromosome:chromosome 6
Location:940203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256300 PPP20,PBCP2,PBCP-LIKE (1 of 9) PF07228 - Stage II sporulation protein E (SpoIIE) (SpoIIE); Phosphoprotein phosphatase 2C-related 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCGGCATGGCCCGTCTCCTCACTCTTTTGCAGTGAGTTCGCTTTAGT
Internal bar code:GTTTAAGGGGCTGGGGACGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4092
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGGCGGTTGTTCGTTA
Suggested primer 2:TGTTGGTGTGTTGACAGGCT