Insertion junction: CLIP2.000156_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.000156
Chromosome:chromosome 17
Location:738511
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g701000 (1 of 1) PTHR35518//PTHR35518:SF2 - FAMILY NOT NAMED // MAINTENANCE OF TELOMERE CAPPING PROTEIN 6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTAAACACCCCATGTGGGCCATGTCCCCCCCACACACACACACGCACA
Internal bar code:AAATAGTATGCGTCCCCAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:756
LEAP-Seq percent confirming:43.3333
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTGCTGTACCTGGACGAC
Suggested primer 2:ATTGAATGTAGGCGGCACCA